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    SCARB2 scavenger receptor class B member 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699990, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SCARB2provided by VGNC
    Official Full Name
    scavenger receptor class B member 2provided by VGNC
    Primary source
    VGNC:VGNC:77026
    See related
    Ensembl:ENSMMUG00000020913
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SCARB2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (57512205..57568565)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (58341322..58398049)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene starch binding domain 1 Neighboring gene family with sequence similarity 47 member E Neighboring gene uncharacterized LOC114678320 Neighboring gene uncharacterized LOC106998347 Neighboring gene nucleoporin 54

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables scavenger receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein targeting to lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor-mediated endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of glucosylceramidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysosome membrane protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      57512205..57568565
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001096458.4 → XP_001096458.1  lysosome membrane protein 2

      UniProtKB/TrEMBL
      F7H503
      Related
      ENSMMUP00000027514.4, ENSMMUT00000029406.4
      Conserved Domains (1) summary
      pfam01130
      Location:28 → 455
      CD36; CD36 family
    Nucleotide Protein
    Heading Accession and Version

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