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    ELFN2 extracellular leucine rich repeat and fibronectin type III domain containing 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697071, updated on 5-Mar-2024

    Summary

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    Gene symbol
    ELFN2
    Gene description
    extracellular leucine rich repeat and fibronectin type III domain containing 2
    See related
    Ensembl:ENSMMUG00000052785
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ELFN2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (14138884..14199587)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (79348913..79408748, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene caspase recruitment domain family member 10 Neighboring gene MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase Neighboring gene cytohesin 4 Neighboring gene Rac family small GTPase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 29
    Names
    leucine-rich repeat and fibronectin type-III domain-containing protein 6
    protein phosphatase 1, regulatory subunit 29

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193792.2 → NP_001180721.1  protein phosphatase 1 regulatory subunit 29 precursor

      See identical proteins and their annotated locations for NP_001180721.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000022
      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      14138884..14199587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015150272.2 → XP_015005758.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    2. XM_028827203.1 → XP_028683036.1  protein phosphatase 1 regulatory subunit 29 isoform X2

      UniProtKB/TrEMBL
      G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    3. XM_015150269.2 → XP_015005755.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    4. XM_028827201.1 → XP_028683034.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    5. XM_015150273.2 → XP_015005759.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    6. XM_028827199.1 → XP_028683032.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    7. XM_015150270.2 → XP_015005756.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    8. XM_015150274.2 → XP_015005760.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    9. XM_028827202.1 → XP_028683035.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Related
      ENSMMUP00000073908.1, ENSMMUT00000082448.1
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    10. XM_028827200.1 → XP_028683033.1  protein phosphatase 1 regulatory subunit 29 isoform X1

      UniProtKB/TrEMBL
      F6QTS4, G7N3S5
      Conserved Domains (4) summary
      TIGR00864
      Location:157 → 227
      PCC; polycystin cation channel protein
      sd00031
      Location:60 → 80
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:200 → 226
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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