U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC6610571 modifier of mdg4 [ Drosophila sechellia ]

    Gene ID: 6610571, updated on 10-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC6610571
    Gene description
    modifier of mdg4
    Locus tag
    Dsec_GM14537
    See related
    EnsemblRapid:LOC6610571
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM14537; GM14537-PA
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC6610571 in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 3L NC_045951.1 (3140701..3142729)

    Chromosome 3L - NC_045951.1Genomic Context describing neighboring genes Neighboring gene G-box-binding factor Neighboring gene NADH:ubiquinone oxidoreductase core subunit S3 Neighboring gene protein-cysteine N-palmitoyltransferase Rasp Neighboring gene LITAF domain-containing protein Neighboring gene ASCIZ zinc finger protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_045951.1 Chromosome 3L Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    modifier of mdg4
    Names
    Dsec\GM14537
    Dsec\GM14537-PA
    dsec_GLEANR_15302

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045951.1 Reference ASM438219v1

      Range
      3140701..3142729
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002035108.2 → XP_002035144.1  modifier of mdg4

      See identical proteins and their annotated locations for XP_002035144.1

      UniProtKB/TrEMBL
      B4HTK9
      Related
      XP_002035144.1, XM_002035108.2
      Conserved Domains (3) summary
      smart00225
      Location:35 → 118
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:20 → 113
      BTB; BTB/POZ domain
      pfam05225
      Location:457 → 500
      HTH_psq; helix-turn-helix, Psq domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials