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    xerD site-specific tyrosine recombinase XerD [ Paenibacillus larvae subsp. larvae ]

    Gene ID: 64218291, updated on 6-Jun-2024

    Summary

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    Gene symbol
    xerD
    Gene description
    site-specific tyrosine recombinase XerD
    Locus tag
    ERICIV_RS07420
    Gene type
    protein coding
    Organism
    Paenibacillus larvae subsp. larvae (strain: Eric_IV, nat-host: honeybees, sub-species: larvae, culture-collection: LMG:16247)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus
    Old locus tag
    ERICIV_01530
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    Genomic context

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    NZ_CP019659.1Genomic Context describing neighboring genes Neighboring gene alanine dehydrogenase Neighboring gene DUF4227 family protein Neighboring gene phosphopentomutase Neighboring gene purine-nucleoside phosphorylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP019659.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Xer Site Specific Recombination: Double and Single Recombinase Systems. Castillo F, et al. Front Microbiol, 2017. PMID 28373867, Free PMC Article
    2. Discovery of Paenibacillus larvae ERIC V: Phenotypic and genomic comparison to genotypes ERIC I-IV reveal different inventories of virulence factors which correlate with epidemiological prevalences of American Foulbrood. Beims H, et al. Int J Med Microbiol, 2020 Feb. PMID 31959580

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    site-specific tyrosine recombinase XerD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP019659.1 Reference assembly

      Range
      1389828..1390724
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_024093703.1 site-specific tyrosine recombinase XerD [Paenibacillus larvae]

      See identical proteins and their annotated locations for WP_024093703.1

      UniProtKB/TrEMBL
      A0A1V0UWH6, A0A2L1TYD3, A0A6C0QQ13, A0A8B6WX20, V9W264
      Conserved Domains (1) summary
      TIGR02225
      Location:6 → 296
      recomb_XerD; tyrosine recombinase XerD
    Nucleotide Protein
    Heading Accession and Version