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    Tmem69 transmembrane protein 69 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 619582, updated on 27-Nov-2024

    Summary

    Symbol
    Tmem69provided by RGD
    Full Name
    transmembrane protein 69provided by RGD
    Primary source
    RGD:1561569
    See related
    EnsemblRapid:ENSRNOG00000029152 AllianceGenome:RGD:1561569
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in mitochondrion. Orthologous to human TMEM69 (transmembrane protein 69). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Heart (RPKM 184.2), Muscle (RPKM 178.5) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Tmem69 in Genome Data Viewer
    Location:
    5q35
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (135241557..135247323, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (130004888..130008466, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (135394013..135397591, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene ribosomal protein L7a, pseudogene 20 Neighboring gene intracisternal A particle-promoted polypeptide Neighboring gene GC-rich promoter binding protein 1-like 1 Neighboring gene coiled-coil domain containing 17 Neighboring gene nuclear autoantigenic sperm protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035001.2NP_001030173.1  transmembrane protein 69

      See identical proteins and their annotated locations for NP_001030173.1

      Status: PROVISIONAL

      Source sequence(s)
      BC161923
      UniProtKB/TrEMBL
      A6JZ76, B1WBX2
      Conserved Domains (1) summary
      pfam11911
      Location:95230
      DUF3429; Protein of unknown function (DUF3429)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      135241557..135247323 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063288339.1XP_063144409.1  transmembrane protein 69 isoform X1

      UniProtKB/TrEMBL
      B1WBX2
      Related
      ENSRNOP00000042975.3, ENSRNOT00000050434.6