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    BT797_RS22510 SgrR family transcriptional regulator [ Moritella viscosa ]

    Gene ID: 61298127, updated on 27-Apr-2024

    Summary

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    Gene symbol
    BT797_RS22510
    Gene description
    SgrR family transcriptional regulator
    Locus tag
    BT797_RS22510
    Gene type
    protein coding
    Organism
    Moritella viscosa (isolate: LFI 5006, nat-host: Salmo salar)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella
    Old locus tag
    concatenated_sequence_orf05125; LFI5006_4549
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    Genomic context

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    NZ_FPLG01000156.1Genomic Context describing neighboring genes Neighboring gene VOC family protein Neighboring gene hypothetical protein Neighboring gene delta-class carbonic anhydrase Neighboring gene M16 family metallopeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_FPLG01000156.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The novel transcription factor SgrR coordinates the response to glucose-phosphate stress. Vanderpool CK, et al. J Bacteriol, 2007 Mar. PMID 17209026, Free PMC Article
    2. Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system. Vanderpool CK, et al. Mol Microbiol, 2004 Nov. PMID 15522088

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    SgrR family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_FPLG01000156.1 Reference assembly

      Range
      62776..64623
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_045109516.1 SgrR family transcriptional regulator [Moritella viscosa]

      See identical proteins and their annotated locations for WP_045109516.1

      UniProtKB/TrEMBL
      A0A090IBG9
      Conserved Domains (3) summary
      COG4533
      Location:13 → 610
      SgrR; DNA-binding transcriptional regulator SgrR of sgrS sRNA, contains a MarR-type HTH domain and a periplasmic-type solute-binding domain [Transcription]
      pfam12793
      Location:9 → 123
      SgrR_N; Sugar transport-related sRNA regulator N-term
      cl01709
      Location:121 → 610
      PBP2_NikA_DppA_OppA_like; The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold
    Nucleotide Protein
    Heading Accession and Version

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