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    A6J42_RS18420 alginate export family protein [ Leptospira interrogans serovar Copenhageni ]

    Gene ID: 61144584, updated on 3-Dec-2024

    Summary

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    Gene symbol
    A6J42_RS18420
    Gene description
    alginate export family protein
    Locus tag
    A6J42_RS18420
    Gene type
    protein coding
    Organism
    Leptospira interrogans serovar Copenhageni (strain: FDAARGOS_203, serovar: Copenhageni, nat-host: Homo sapiens, culture-collection: ATCC:BAA-1198D-5, culture-collection: FDA:FDAARGOS_203)
    Lineage
    Bacteria; Spirochaetota; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira
    Old locus tag
    A6J42_18785
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    Genomic context

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    NZ_CP020414.2Genomic Context describing neighboring genes Neighboring gene 6-carboxytetrahydropterin synthase Neighboring gene sulfate ABC transporter substrate-binding protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene DUF2225 domain-containing protein Neighboring gene tRNA pseudouridine(38-40) synthase TruA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP020414.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural basis for alginate secretion across the bacterial outer membrane. Whitney JC, et al. Proc Natl Acad Sci U S A, 2011 Aug 9. PMID 21778407, Free PMC Article
    2. Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads. Llanes A, et al. Microbiol Resour Announc, 2020 Apr 23. PMID 32327507, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    alginate export family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP020414.2 Reference assembly

      Range
      3856064..3857893 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000739012.1 MULTISPECIES: alginate export family protein [Leptospira]

      See identical proteins and their annotated locations for WP_000739012.1

      UniProtKB/TrEMBL
      A0A0E2DAG8, A0A0F6HCW6, A0AAP9WLF8, A0AAQ0AYB9, A0AAV9FTV0, A0AAW4K5Z2, M3E299, Q72SV4, Q8F2M3
      Conserved Domains (1) summary
      cl16257
      Location:113 → 579
      Alginate_exp; Alginate export
    Nucleotide Protein
    Heading Accession and Version

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