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    A6J42_RS16570 restriction endonuclease subunit S [ Leptospira interrogans serovar Copenhageni ]

    Gene ID: 61144257, updated on 3-Dec-2024

    Summary

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    Gene symbol
    A6J42_RS16570
    Gene description
    restriction endonuclease subunit S
    Locus tag
    A6J42_RS16570
    Gene type
    protein coding
    Organism
    Leptospira interrogans serovar Copenhageni (strain: FDAARGOS_203, serovar: Copenhageni, nat-host: Homo sapiens, culture-collection: ATCC:BAA-1198D-5, culture-collection: FDA:FDAARGOS_203)
    Lineage
    Bacteria; Spirochaetota; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira
    Old locus tag
    A6J42_16920
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    Genomic context

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    NZ_CP020414.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene type I restriction endonuclease subunit R Neighboring gene AAA family ATPase Neighboring gene type I restriction-modification system subunit M Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP020414.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The DNA recognition subunit of the type IB restriction-modification enzyme EcoAI tolerates circular permutions of its polypeptide chain. Janscak P, et al. J Mol Biol, 1998 Dec 11. PMID 9837717
    2. Biology of DNA restriction. Bickle TA, et al. Microbiol Rev, 1993 Jun. PMID 8336674, Free PMC Article
    3. Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads. Llanes A, et al. Microbiol Resour Announc, 2020 Apr 23. PMID 32327507, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    restriction endonuclease subunit S
    WP_000083101.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP020414.2 Reference assembly

      Range
      3412323..3413504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000083101.1 restriction endonuclease subunit S [Leptospira interrogans]

      See identical proteins and their annotated locations for WP_000083101.1

      UniProtKB/TrEMBL
      A0AAW4K1A8, M3ID14, M6RIU5, Q72TT6
      Conserved Domains (2) summary
      cd17281
      Location:15 → 206
      RMtype1_S_HpyAXIII_TRD1-CR1_like; Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Helicobacter pylori 26695 S subunit (S.HpyAXIII/Prototype S.Hpy26695ORF4050P) TRD1-CR1, Neisseria meningitidis 510612 S subunit
      cd17291
      Location:213 → 379
      RMtype1_S_MgeORF438P-TRD-CR_like; Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S.MgeORF438P TRD1-CR1 and TRD2-CR2, and to Escherichia coli G5 S subunit (S.Eco16445ORF5013P ) TRD2-CR2 and Acetobacter pasteuri
    Nucleotide Protein
    Heading Accession and Version