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    BF9343_RS15345 helix-turn-helix domain-containing protein [ Bacteroides fragilis NCTC 9343 ]

    Gene ID: 60366157, updated on 11-Dec-2024

    Summary

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    Gene symbol
    BF9343_RS15345
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    BF9343_RS15345
    Gene type
    protein coding
    Organism
    Bacteroides fragilis NCTC 9343 (strain: NCTC 9343, culture-collection: ATCC:25285, culture-collection: NCTC:9343, type-material: type strain of Bacteroides fragilis)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    BF9343_3108
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    Genomic context

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    Sequence:
    NC_003228.3 (3748967..3749845)

    NC_003228.3Genomic Context describing neighboring genes Neighboring gene TolC family protein Neighboring gene efflux RND transporter permease subunit Neighboring gene efflux RND transporter periplasmic adaptor subunit Neighboring gene aminopeptidase C Neighboring gene LytTR family DNA-binding domain-containing protein Neighboring gene sensor histidine kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003228.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive DNA inversions in the B. fragilis genome control variable gene expression. Cerdeño-Tárraga AM, et al. Science, 2005 Mar 4. PMID 15746427
    2. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003228.3 Reference assembly

      Range
      3748967..3749845
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005789684.1 MULTISPECIES: helix-turn-helix domain-containing protein [Bacteroides]

      UniProtKB/TrEMBL
      A0A015SMI8, A0A015X7S5, A0A016E571, A0A0E2AKS2, A0A149NM96, A0AAN4N0W2, A0AAV3MRZ0, A0AAV3N7N8, D1JSH9, E1WU60, F7LUK1, Q5LAI4, Q64QX4
    Nucleotide Protein
    Heading Accession and Version