U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    EDI_071630 40S ribosomal protein S7, putative [ Entamoeba dispar SAW760 ]

    Gene ID: 5879420, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    EDI_071630
    Gene description
    40S ribosomal protein S7, putative
    Locus tag
    EDI_071630
    See related
    AmoebaDB:EDI_071630; VEuPathDB:EDI_071630
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba dispar SAW760 (strain: SAW760)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See EDI_071630 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001853119.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene 60S ribosomal protein L6, putative Neighboring gene sentrin-specific protease, putative

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_001853119.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal small subunit biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 90S preribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    40S ribosomal protein S7, putative
    XP_001734506.1
    • encoded by transcript EDI_071630A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001853119.1 Reference assembly

      Range
      25814..26419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001734454.1 → XP_001734506.1  40S ribosomal protein S7, putative [Entamoeba dispar SAW760]

      See identical proteins and their annotated locations for XP_001734506.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0E814
      Conserved Domains (1) summary
      PTZ00389
      Location:5 → 201
      PTZ00389; 40S ribosomal protein S7; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials