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    her7 hairy and enhancer of split related-7 [ Danio rerio (zebrafish) ]

    Gene ID: 58132, updated on 9-Dec-2024

    Summary

    Official Symbol
    her7provided by ZNC
    Official Full Name
    hairy and enhancer of split related-7provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-000427-6
    See related
    Ensembl:ENSDARG00000017917 AllianceGenome:ZFIN:ZDB-GENE-000427-6
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    cb715
    Summary
    Enables identical protein binding activity. Acts upstream of or within somite specification. Predicted to be active in nucleus. Is expressed in several structures, including liver; margin; mesoderm; presumptive mesoderm; and tail bud. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See her7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (68807198..68808485)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (68036531..68037818)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene methylphosphate capping enzyme a Neighboring gene hairy-related 1 Neighboring gene si:ch211-283h6.4 Neighboring gene ubiquitin specific peptidase 39

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General protein information

    Preferred Names
    hairy and enhancer of split related-7
    Names
    her7-protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_131609.1NP_571684.1  hairy and enhancer of split related-7

      See identical proteins and their annotated locations for NP_571684.1

      Status: PROVISIONAL

      Source sequence(s)
      AF240772
      UniProtKB/TrEMBL
      A0A8M9PKJ6, Q9I9K1
      Related
      ENSDARP00000006074.4, ENSDART00000017849.5
      Conserved Domains (1) summary
      pfam07527
      Location:85120
      Hairy_orange; Hairy Orange

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      68807198..68808485
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)