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    NMAR_RS02845 tRNA pseudouridine(54/55) synthase Pus10 [ Nitrosopumilus maritimus SCM1 ]

    Gene ID: 5773391, updated on 31-Mar-2024

    Summary

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    Gene symbol
    NMAR_RS02845
    Gene description
    tRNA pseudouridine(54/55) synthase Pus10
    Locus tag
    NMAR_RS02845
    Gene type
    protein coding
    Organism
    Nitrosopumilus maritimus SCM1 (strain: SCM1, type-material: type strain of Nitrosopumilus maritimus)
    Lineage
    Archaea; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus
    Old locus tag
    Nmar_0532
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    Genomic context

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    Sequence:
    NC_010085.1 (473435..474580)

    NC_010085.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-5A Neighboring gene diphthine--ammonia ligase Neighboring gene signal recognition particle receptor subunit alpha Neighboring gene hypothetical protein Neighboring gene 30S ribosomal protein S27ae Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_010085.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of Eukaryal and Archaeal Pseudouridine Synthase Pus10. Fitzek E, et al. J Mol Evol, 2018 Jan. PMID 29349599, Free PMC Article
    2. Role of forefinger and thumb loops in production of Ψ54 and Ψ55 in tRNAs by archaeal Pus10. Joardar A, et al. RNA, 2013 Sep. PMID 23898217, Free PMC Article
    3. Pseudouridine formation in archaeal RNAs: The case of Haloferax volcanii. Blaby IK, et al. RNA, 2011 Jul. PMID 21628430, Free PMC Article
    4. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Walker CB, et al. Proc Natl Acad Sci U S A, 2010 May 11. PMID 20421470, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    tRNA pseudouridine(54/55) synthase Pus10
    WP_012214915.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010085.1 Reference assembly

      Range
      473435..474580
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012214915.1 tRNA pseudouridine(54/55) synthase Pus10 [Nitrosopumilus maritimus]

      See identical proteins and their annotated locations for WP_012214915.1

      UniProtKB/Swiss-Prot
      A9A215
      Conserved Domains (1) summary
      cl28383
      Location:6 → 379
      Pus10; tRNA U54 and U55 pseudouridine synthase Pus10 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A9A215.1