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    SERAS9_RS06395 response regulator transcription factor [ Serratia plymuthica AS9 ]

    Gene ID: 57666075, updated on 15-Apr-2023

    Summary

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    Gene symbol
    SERAS9_RS06395
    Gene description
    response regulator transcription factor
    Locus tag
    SERAS9_RS06395
    Gene type
    protein coding
    Organism
    Serratia plymuthica AS9 (strain: AS9, nat-host: rape)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Serratia
    Old locus tag
    SerAS9_1259
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    Genomic context

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    Sequence:
    NC_015567.1 (1380753..1381358, complement)

    NC_015567.1Genomic Context describing neighboring genes Neighboring gene nicotinamide riboside transporter PnuC Neighboring gene transporter substrate-binding domain-containing protein Neighboring gene CDF family zinc transporter ZitB Neighboring gene 3-deoxy-7-phosphoheptulonate synthase AroG Neighboring gene 2,3-diphosphoglycerate-dependent phosphoglycerate mutase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_015567.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9. Neupane S, et al. Stand Genomic Sci, 2012 Mar 19. PMID 22675598, Free PMC Article
    2. Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH(2)). Huntemann M, et al. Stand Genomic Sci, 2011 Jul 1. PMID 21886857, Free PMC Article
    3. Two-component signal transduction. Stock AM, et al. Annu Rev Biochem, 2000. PMID 10966457

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    response regulator transcription factor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015567.1 Reference assembly

      Range
      1380753..1381358 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013811937.1 MULTISPECIES: response regulator transcription factor [Serratia]

      See identical proteins and their annotated locations for WP_013811937.1

      UniProtKB/TrEMBL
      A0A7U3YZY5
      Conserved Domains (3) summary
      smart00421
      Location:140 → 194
      HTH_LUXR; helix_turn_helix, Lux Regulon
      COG2197
      Location:4 → 199
      CitB; DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]
      cd00156
      Location:5 → 119
      REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
    Nucleotide Protein
    Heading Accession and Version