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    uncharacterized protein [ Chlamydomonas reinhardtii ]

    Gene ID: 5721715, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    Phytozome:Cre08.g368950
    Locus tag
    CHLRE_08g368950v5
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Chlamydomonas reinhardtii (strain: CC-503 cw92 mt+)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
    Old locus tag
    CHLREDRAFT_196549
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    9
    Sequence:
    Chromosome: 8; NC_057011.1 (2123316..2128255)

    Chromosome 8 - NC_057011.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057011.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Chlamydomonas genome reveals the evolution of key animal and plant functions. Merchant SS, et al. Science, 2007 Oct 12. PMID 17932292, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-dehydroquinate synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aromatic amino acid family biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_057011.1 Reference assembly

      Range
      2123316..2128255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001696024.2 → XP_001696076.1  uncharacterized protein CHLRE_08g368950v5 [Chlamydomonas reinhardtii]

      See identical proteins and their annotated locations for XP_001696076.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A8J463
      Conserved Domains (1) summary
      PLN02834
      Location:15 → 468
      PLN02834; 3-dehydroquinate synthase
    Nucleotide Protein
    Heading Accession and Version

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