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    iolE myo-inosose-2 dehydratase [ Pectobacterium atrosepticum ]

    Gene ID: 57208276, updated on 30-Mar-2024

    Summary

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    Gene symbol
    iolE
    Gene description
    myo-inosose-2 dehydratase
    Locus tag
    GZ59_RS07250
    Gene type
    protein coding
    Organism
    Pectobacterium atrosepticum (strain: 21A, nat-host: Solanum tuberosum)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
    Old locus tag
    GZ59_15030
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    Genomic context

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    NZ_CP009125.1Genomic Context describing neighboring genes Neighboring gene Gfo/Idh/MocA family oxidoreductase Neighboring gene 5-dehydro-2-deoxygluconokinase Neighboring gene 5-deoxy-glucuronate isomerase Neighboring gene ABC transporter ATP-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP009125.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SigmoID: a user-friendly tool for improving bacterial genome annotation through analysis of transcription control signals. Nikolaichik Y, et al. PeerJ, 2016. PMID 27257541, Free PMC Article
    2. Genome Sequence of Pectobacterium atrosepticum Strain 21A. Nikolaichik Y, et al. Genome Announc, 2014 Sep 18. PMID 25237028, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    myo-inosose-2 dehydratase
    WP_039290929.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP009125.1 Reference assembly

      Range
      1645897..1646787
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_039290929.1 myo-inosose-2 dehydratase [Pectobacterium atrosepticum]

      See identical proteins and their annotated locations for WP_039290929.1

      Conserved Domains (1) summary
      TIGR04379
      Location:2 → 290
      myo_inos_iolE; myo-inosose-2 dehydratase
    Nucleotide Protein
    Heading Accession and Version