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    si:dkeyp-38g8.5 si:dkeyp-38g8.5 [ Danio rerio (zebrafish) ]

    Gene ID: 568385, updated on 9-Dec-2024

    Summary

    Official Symbol
    si:dkeyp-38g8.5provided by ZNC
    Official Full Name
    si:dkeyp-38g8.5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-081104-62
    See related
    Ensembl:ENSDARG00000056954 AllianceGenome:ZFIN:ZDB-GENE-081104-62
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to be involved in cytoplasmic sequestering of protein. Predicted to be active in cytoskeleton. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See si:dkeyp-38g8.5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (16315692..16319762)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (16326716..16330786)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137491536 Neighboring gene ATPase plasma membrane Ca2+ transporting 1a Neighboring gene uncharacterized LOC103910439 Neighboring gene epiphycan Neighboring gene keratocan

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    uncharacterized protein LOC568385

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001123290.1NP_001116762.1  uncharacterized protein LOC568385

      Status: PREDICTED

      Source sequence(s)
      BX322608
      UniProtKB/TrEMBL
      A0A8M1NGS0, B0S5X1
      Related
      ENSDARP00000050406.6, ENSDART00000050407.7
      Conserved Domains (2) summary
      pfam13837
      Location:43122
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
      cl19107
      Location:198289
      SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      16315692..16319762
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)