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    emp3b epithelial membrane protein 3b (MAM blood group) [ Danio rerio (zebrafish) ]

    Gene ID: 560722, updated on 9-Dec-2024

    Summary

    Official Symbol
    emp3bprovided by ZNC
    Official Full Name
    epithelial membrane protein 3b (MAM blood group)provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050913-51
    See related
    Ensembl:ENSDARG00000101461 AllianceGenome:ZFIN:ZDB-GENE-050913-51
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:114127
    Summary
    Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human EMP3 (epithelial membrane protein 3 (MAM blood group)). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See emp3b in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (18779043..18794561)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (18852700..18868218)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene myosin, heavy chain 7B, cardiac muscle, beta b Neighboring gene transient receptor potential cation channel, subfamily C, member 4 associated protein b Neighboring gene NSFL1 (p97) cofactor (p47) Neighboring gene wu:fa11c10

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC114127

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    epithelial membrane protein 3b (MAM blood group)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025508.1NP_001020679.1  epithelial membrane protein 3b (MAM blood group) precursor

      See identical proteins and their annotated locations for NP_001020679.1

      Status: PROVISIONAL

      Source sequence(s)
      BC097185
      UniProtKB/TrEMBL
      A0A8M1N6W8, Q4V8V3
      Related
      ENSDARP00000131974.1, ENSDART00000158267.2
      Conserved Domains (1) summary
      cl21598
      Location:1158
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      18779043..18794561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)