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    zgc:162928 zgc:162928 [ Danio rerio (zebrafish) ]

    Gene ID: 557144, updated on 9-Dec-2024

    Summary

    Official Symbol
    zgc:162928provided by ZNC
    Official Full Name
    zgc:162928provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070410-112
    See related
    Ensembl:ENSDARG00000095034 AllianceGenome:ZFIN:ZDB-GENE-070410-112
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Orthologous to human C8orf34 (chromosome 8 open reading frame 34). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See zgc:162928 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (19210067..19402794)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (19065654..19258375)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene carboxypeptidase A6 Neighboring gene phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 Neighboring gene sulfatase 1 Neighboring gene solute carrier organic anion transporter family member 5A1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein C8orf34 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001430954.1NP_001417883.1  uncharacterized protein C8orf34 homolog

      Status: VALIDATED

      Source sequence(s)
      CR354607, CR384092
      UniProtKB/TrEMBL
      A0A286Y8T7, A0A8M2B9S4
      Related
      ENSDARP00000143589.1, ENSDART00000179373.2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      19210067..19402794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005162707.5XP_005162764.1  uncharacterized protein C8orf34 homolog isoform X1

      UniProtKB/TrEMBL
      A0A286Y8T7, A0A8M2B9L9, A0A8M2B9S4

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001089499.1: Suppressed sequence

      Description
      NM_001089499.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.