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    LOC5514652 transcription factor COE3 [ Nematostella vectensis (starlet sea anemone) ]

    Gene ID: 5514652, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC5514652
    Gene description
    transcription factor COE3
    Locus tag
    NEMVEDRAFT_v1g164975
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nematostella vectensis
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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    Genomic context

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    See LOC5514652 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current jaNemVect1.1 (GCF_932526225.1) 6 NC_064039.1 (2884175..2891471)
    100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834359.1 (508356..515495)

    Chromosome 6 - NC_064039.1Genomic Context describing neighboring genes Neighboring gene CUB and peptidase domain-containing protein 2 Neighboring gene coiled-coil domain-containing protein 186 Neighboring gene QWRF motif-containing protein 9 Neighboring gene uncharacterized LOC116619463 Neighboring gene serine/threonine-protein kinase 38-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor COE3
    Names
    predicted protein
    trancription factor COE

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference jaNemVect1.1

    Genomic

    1. NC_064039.1 Reference jaNemVect1.1

      Range
      2884175..2891471
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001634712.3 → XP_001634762.2  transcription factor COE3

      UniProtKB/TrEMBL
      A7S0M6
    Nucleotide Protein
    Heading Accession and Version

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