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    SS1G_06114 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

    Gene ID: 5489106, updated on 16-Nov-2023

    Summary

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    Gene symbol
    SS1G_06114
    Gene description
    hypothetical protein
    Locus tag
    SS1G_06114
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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    Genomic context

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    See SS1G_06114 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_001820829.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001820829.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001820829.1 Reference assembly

      Range
      1378657..1379264
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001593142.1 → XP_001593192.1  hypothetical protein SS1G_06114 [Sclerotinia sclerotiorum 1980 UF-70]

      See identical proteins and their annotated locations for XP_001593192.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1D9Q431, A7ELB7
      Conserved Domains (1) summary
      cd06926
      Location:14 → 106
      RNAP_II_RPB11; RPB11 subunit of Eukaryotic RNA polymerase II
    Nucleotide Protein
    Heading Accession and Version

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