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    LOC548046 O-fucosyltransferase 36 [ Glycine max (soybean) ]

    Gene ID: 548046, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC548046
    Gene description
    O-fucosyltransferase 36
    Locus tag
    GLYMA_16G014800v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    Also known as
    FUT13
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    Genomic context

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    See LOC548046 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 16 NC_038252.2 (1289892..1293228)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 16 NC_038252.1 (1299584..1302894)

    Chromosome 16 - NC_038252.2Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene nematode resistance protein-like HSPRO2 Neighboring gene uncharacterized LOC102665479 Neighboring gene tyrosine-sulfated glycopeptide receptor 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptide-O-fucosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein O-linked fucosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    O-fucosyltransferase 36
    Names
    protein-O-fucosyltransferase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038252.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      1289892..1293228
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003547901.5 → XP_003547949.1  O-fucosyltransferase 36

      UniProtKB/TrEMBL
      I1MK83
      Conserved Domains (1) summary
      cd11296
      Location:365 → 517
      O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
    Nucleotide Protein
    Heading Accession and Version

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