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    tssG type VI secretion system baseplate subunit TssG [ Aliivibrio fischeri ES114 ]

    Gene ID: 54163672, updated on 27-Aug-2024

    Summary

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    Gene symbol
    tssG
    Gene description
    type VI secretion system baseplate subunit TssG
    Locus tag
    VF_RS05220
    Gene type
    protein coding
    Organism
    Aliivibrio fischeri ES114 (strain: ES114)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio
    Old locus tag
    VF1000; VF_1000
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    Genomic context

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    Location:
    chromosome: I
    Sequence:
    Chromosome: I; NC_006840.2 (1104430..1105470, complement)

    Chromosome I - NC_006840.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene sigma-54-dependent Fis family transcriptional regulator Neighboring gene type VI secretion system ATPase TssH Neighboring gene type VI secretion system baseplate subunit TssF Neighboring gene type VI secretion system baseplate subunit TssE Neighboring gene type VI secretion system contractile sheath large subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006840.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: focus on point miscalls and artefactual expansions. Mandel MJ, et al. BMC Genomics, 2008 Mar 25. PMID 18366731, Free PMC Article
    2. Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners. Ruby EG, et al. Proc Natl Acad Sci U S A, 2005 Feb 22. PMID 15703294, Free PMC Article
    3. In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages. Shalom G, et al. Microbiology (Reading), 2007 Aug. PMID 17660433
    4. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type VI secretion system baseplate subunit TssG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006840.2 Reference assembly

      Range
      1104430..1105470 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011261633.1 type VI secretion system baseplate subunit TssG [Aliivibrio fischeri]

      See identical proteins and their annotated locations for WP_011261633.1

      UniProtKB/TrEMBL
      Q5E651
    Nucleotide Protein
    Heading Accession and Version