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    HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 [ Bos taurus (domestic cattle) ]

    Gene ID: 541202, updated on 10-Oct-2024

    Summary

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    Official Symbol
    HNRNPH1provided by VGNC
    Official Full Name
    heterogeneous nuclear ribonucleoprotein H1provided by VGNC
    Primary source
    VGNC:VGNC:52245
    See related
    BGD:BT16472; Ensembl:ENSBTAG00000009389
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    HNRPH1
    Orthologs
    human mouse all
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    Genomic context

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    See HNRNPH1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (1694622..1703640)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene chibby family member 3 Neighboring gene tubulin alpha-1B chain-like Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene RUN and FYVE domain containing 1 Neighboring gene uncharacterized LOC104969036 Neighboring gene small nucleolar RNA SNORA11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein H
    Names
    heterogeneous nuclear ribonucleoprotein H1 (H)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193234.1 → NP_001180163.1  heterogeneous nuclear ribonucleoprotein H

      See identical proteins and their annotated locations for NP_001180163.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000007
      UniProtKB/TrEMBL
      A0A3Q1MIM4, A0A3Q1N348
      Related
      ENSBTAP00000074169.2, ENSBTAT00000081998.2
      Conserved Domains (4) summary
      pfam08080
      Location:255 → 290
      zf-RNPHF; RNPHF zinc finger
      cd12729
      Location:10 → 88
      RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
      cd12731
      Location:103 → 192
      RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
      cd12734
      Location:289 → 364
      RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      1694622..1703640
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059888357.1 → XP_059744340.1  heterogeneous nuclear ribonucleoprotein H isoform X2

      Related
      ENSBTAP00000063780.1, ENSBTAT00000076005.2

    2. XM_005208379.4 → XP_005208436.1  heterogeneous nuclear ribonucleoprotein H isoform X1

      See identical proteins and their annotated locations for XP_005208436.1

      UniProtKB/TrEMBL
      A0A3Q1N348
      Conserved Domains (4) summary
      pfam08080
      Location:255 → 290
      zf-RNPHF; RNPHF zinc finger
      cd12729
      Location:10 → 88
      RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
      cd12731
      Location:103 → 192
      RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
      cd12734
      Location:289 → 364
      RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

    3. XM_024994552.2 → XP_024850320.1  heterogeneous nuclear ribonucleoprotein H isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MIG4, A0A3Q1N348
      Related
      ENSBTAP00000071066.2, ENSBTAT00000068240.2
      Conserved Domains (4) summary
      pfam08080
      Location:255 → 290
      zf-RNPHF; RNPHF zinc finger
      cd12729
      Location:10 → 88
      RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
      cd12731
      Location:103 → 192
      RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
      cd12734
      Location:289 → 364
      RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

    4. XM_005208381.5 → XP_005208438.1  heterogeneous nuclear ribonucleoprotein H isoform X3

      See identical proteins and their annotated locations for XP_005208438.1

      UniProtKB/TrEMBL
      A0A3Q1MIM4, A0A3Q1N348
      Conserved Domains (4) summary
      pfam08080
      Location:255 → 290
      zf-RNPHF; RNPHF zinc finger
      cd12729
      Location:10 → 88
      RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
      cd12731
      Location:103 → 192
      RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
      cd12734
      Location:289 → 364
      RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

    5. XM_059888358.1 → XP_059744341.1  heterogeneous nuclear ribonucleoprotein H isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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