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    GSPATT00027129001 uncharacterized protein [ Paramecium tetraurelia ]

    Gene ID: 5047962, updated on 23-Nov-2023

    Summary

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    Gene symbol
    GSPATT00027129001
    Gene description
    uncharacterized protein
    Locus tag
    GSPATT00027129001
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Paramecium tetraurelia (strain: Stock d4-2)
    Lineage
    Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium
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    Genomic context

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    See GSPATT00027129001 in Genome Data Viewer
    Location:
    chromosome: undetermined
    Exon count:
    3

    NW_001799649.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001799649.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Aury JM, et al. Nature, 2006 Nov 9. PMID 17086204
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001799649.1 Reference assembly

      Range
      181637..182654
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001462140.1 → XP_001462177.1  uncharacterized protein GSPATT00027129001 [Paramecium tetraurelia]

      See identical proteins and their annotated locations for XP_001462177.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0EHL3
      Conserved Domains (2) summary
      smart00404
      Location:72 → 141
      PTPc_motif; Protein tyrosine phosphatase, catalytic domain motif
      pfam10409
      Location:170 → 309
      PTEN_C2; C2 domain of PTEN tumour-suppressor protein
    Nucleotide Protein
    Heading Accession and Version

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