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    Erich6 glutamate-rich 6 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499626, updated on 9-Dec-2024

    Summary

    Official Symbol
    Erich6provided by RGD
    Official Full Name
    glutamate-rich 6provided by RGD
    Primary source
    RGD:1559451
    See related
    EnsemblRapid:ENSRNOG00000013662 AllianceGenome:RGD:1559451
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Fam194a
    Summary
    Orthologous to human ERICH6 (glutamate rich 6). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 51.7) and Brain (RPKM 3.9) See more
    Orthologs
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    Genomic context

    See Erich6 in Genome Data Viewer
    Location:
    2q26
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (145001833..145027935, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (142851905..142878010, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (148812060..148861470, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2A Neighboring gene selenoprotein T Neighboring gene uncharacterized LOC134485621 Neighboring gene siah E3 ubiquitin protein ligase 2 Neighboring gene MINDY family member 4B

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    glutamate-rich protein 6
    Names
    family with sequence similarity 194, member A
    protein FAM194A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024300.1NP_001019471.1  glutamate-rich protein 6

      See identical proteins and their annotated locations for NP_001019471.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083834
      UniProtKB/Swiss-Prot
      Q5XI56
      UniProtKB/TrEMBL
      A0A0H2UHL0
      Related
      ENSRNOP00000018294.5, ENSRNOT00000018294.7
      Conserved Domains (1) summary
      pfam14977
      Location:362558
      FAM194; FAM194 protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      145001833..145027935 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)