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    TVAGG3_0675360 cyclin-dependent kinase inhibitor 2C-related family [ Trichomonas vaginalis G3 ]

    Gene ID: 4766162, updated on 17-May-2024

    Summary

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    Gene symbol
    TVAGG3_0675360
    Gene description
    cyclin-dependent kinase inhibitor 2C-related family
    Locus tag
    TVAGG3_0675360
    See related
    TrichDB:TVAGG3_0675360; VEuPathDB:TVAGG3_0675360
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v0675360
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    Genomic context

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    See TVAGG3_0675360 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_067205.1 (10111960..10113369, complement)

    Chromosome III - NC_067205.1Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family Neighboring gene Ankyrin repeat family Neighboring gene hypothetical protein Neighboring gene protein serine/threonine kinase protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067205.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • replaces TrichDB:TVAG_404320

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-dependent kinase inhibitor 2C-related family
    XP_001320487.1
    • eggNOG seed ortholog:5722.XP_001320487.1;replaces TrichDB:TVAG_404320

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067205.1 Reference assembly

      Range
      10111960..10113369 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001320452.1 → XP_001320487.1  cyclin-dependent kinase inhibitor 2C-related family [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001320487.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2EGI1
      Conserved Domains (3) summary
      cd00204
      Location:217 → 342
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:260 → 351
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:222 → 253
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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