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    TVAGG3_0582670 protein of unknown function (DUF3447) [ Trichomonas vaginalis G3 ]

    Gene ID: 4745832, updated on 17-May-2024

    Summary

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    Gene symbol
    TVAGG3_0582670
    Gene description
    protein of unknown function (DUF3447)
    Locus tag
    TVAGG3_0582670
    See related
    TrichDB:TVAGG3_0582670; VEuPathDB:TVAGG3_0582670
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v0582670
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    Genomic context

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    See TVAGG3_0582670 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_067204.1 (21093514..21094705, complement)

    Chromosome II - NC_067204.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat-containing protein DDB G0279043 family Neighboring gene Mariner transposase Neighboring gene VPS9 domain family Neighboring gene protein serine/threonine kinase protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067204.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • replaces TrichDB:TVAG_242610

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein of unknown function (DUF3447)
    XP_001301107.1
    • eggNOG seed ortholog:5722.XP_001301107.1;replaces TrichDB:TVAG_242610

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067204.1 Reference assembly

      Range
      21093514..21094705 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001301106.1 → XP_001301107.1  protein of unknown function (DUF3447) [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001301107.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2G3U2
      Conserved Domains (4) summary
      cd00204
      Location:236 → 336
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam11929
      Location:135 → 210
      DUF3447; Domain of unknown function (DUF3447)
      pfam12796
      Location:257 → 342
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:282 → 313
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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