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    IL21 interleukin 21 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 471295, updated on 17-Aug-2024

    Summary

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    Official Symbol
    IL21provided by VGNC
    Official Full Name
    interleukin 21provided by VGNC
    Primary source
    VGNC:VGNC:618
    Locus tag
    CK820_G0025875
    See related
    Ensembl:ENSPTRG00000016419
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See IL21 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (123793644..123804576, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) Unplaced Scaffold NW_026545643.1 (44699..55652)

    Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134809913 Neighboring gene adenosine deaminase domain containing 1 Neighboring gene interleukin 2 Neighboring gene uncharacterized LOC104006191 Neighboring gene uncharacterized LOC100608395 Neighboring gene Bardet-Biedl syndrome 12 Neighboring gene fibroblast growth factor 2 Neighboring gene nudix hydrolase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of natural killer cell mediated cytotoxicity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interleukin-21

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      123793644..123804576 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_526677.8 → XP_526677.2  interleukin-21

      See identical proteins and their annotated locations for XP_526677.2

      UniProtKB/TrEMBL
      A0A2J8LX33, A0A6D2XP07, H2QQ45
      Related
      ENSPTRP00000028194.2
      Conserved Domains (1) summary
      pfam02372
      Location:42 → 148
      IL15; Interleukin 15
    Nucleotide Protein
    Heading Accession and Version

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