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    TMPO thymopoietin [ Pan troglodytes (chimpanzee) ]

    Gene ID: 452151, updated on 10-Oct-2024

    Summary

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    Official Symbol
    TMPOprovided by VGNC
    Official Full Name
    thymopoietinprovided by VGNC
    Primary source
    VGNC:VGNC:13479
    Locus tag
    CK820_G0016154
    See related
    Ensembl:ENSPTRG00000005331
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See TMPO in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (105343812..105381574)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (103963789..104001551)

    Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein encoded by LINC00596 Neighboring gene sodium/hydrogen exchanger 7-like Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene small nucleolar RNA SNORA53 Neighboring gene solute carrier family 25 member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lamina-associated polypeptide 2, isoform beta; thymopoietin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      105343812..105381574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001148998.7 → XP_001148998.3  thymopoietin isoform X3

      UniProtKB/TrEMBL
      A0A2J8N0I6, A0A6D2WYE4, H2Q6N8

    2. XM_016924939.4 → XP_016780428.3  thymopoietin isoform X4

      UniProtKB/TrEMBL
      A0A2I3TKC2, A0A2J8N0J3, A0A6D2WK28

    3. XM_003313873.6 → XP_003313921.3  thymopoietin isoform X6

      UniProtKB/TrEMBL
      A0A2J8N0K4, A0A6D2WG24, K6ZJD5

    4. XM_016924941.4 → XP_016780430.3  thymopoietin isoform X5

    5. XM_509288.8 → XP_509288.2  thymopoietin isoform X1

      See identical proteins and their annotated locations for XP_509288.2

      UniProtKB/TrEMBL
      A0A2J8N0K2, A0A6D2W519, K7C541
      Related
      ENSPTRP00000066712.1
      Conserved Domains (3) summary
      cd12940
      Location:111 → 139
      LEM_LAP2_LEMD1; LEM (Lap2/Emerin/Man1) domain found in lamina-associated polypeptide 2 (LAP2), LEM domain-containing protein 1 (LEMP-1) and similar proteins
      pfam08198
      Location:3 → 49
      Thymopoietin; Thymopoietin protein
      pfam11560
      Location:461 → 693
      LAP2alpha; Lamina-associated polypeptide 2 alpha

    6. XM_054663434.2 → XP_054519409.1  thymopoietin isoform X2

    RNA

    1. XR_010148403.1 RNA Sequence

    2. XR_010148404.1 RNA Sequence

    3. XR_010148402.1 RNA Sequence

    4. XR_010148405.1 RNA Sequence

    5. XR_010148406.1 RNA Sequence

    6. XR_010148407.1 RNA Sequence

    7. XR_010148408.1 RNA Sequence

    8. XR_010148409.1 RNA Sequence

    9. XR_010148410.1 RNA Sequence

    10. XR_010148411.1 RNA Sequence

    11. XR_010148412.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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