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    CALY calcyon neuron specific vesicular protein [ Pan troglodytes (chimpanzee) ]

    Gene ID: 450851, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CALYprovided by VGNC
    Official Full Name
    calcyon neuron specific vesicular proteinprovided by VGNC
    Primary source
    VGNC:VGNC:7223
    Locus tag
    CK820_G0051367
    See related
    Ensembl:ENSPTRG00000003091
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    DRD1IP
    Orthologs
    human mouse all
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    Genomic context

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    See CALY in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (145584771..145597247, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (136227883..136240369, complement)

    Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 8 Neighboring gene tubulin gamma complex component 2 Neighboring gene zinc finger protein 511 Neighboring gene uncharacterized LOC134807223 Neighboring gene proline rich acidic protein 1 Neighboring gene barrier-to-autointegration factor-like Neighboring gene fucose mutarotase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin light chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled dopamine receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in clathrin coat assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosomal transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neuron-specific vesicular protein calcyon
    Names
    dopamine receptor D1 interacting protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      145584771..145597247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016919675.3 → XP_016775164.1  neuron-specific vesicular protein calcyon

      UniProtKB/TrEMBL
      A0A2J8J1I3, A0A6D2WU53, H2Q2T6
      Related
      ENSPTRP00000005444.3
      Conserved Domains (1) summary
      pfam06387
      Location:1 → 179
      Calcyon; D1 dopamine receptor-interacting protein (calcyon)
    Nucleotide Protein
    Heading Accession and Version

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