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    BDV38DRAFT_278945 ubiquitin carboxyl-terminal hydrolase [ Aspergillus pseudotamarii ]

    Gene ID: 43643076, updated on 22-Oct-2023

    Summary

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    Gene symbol
    BDV38DRAFT_278945
    Gene description
    ubiquitin carboxyl-terminal hydrolase
    Locus tag
    BDV38DRAFT_278945
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aspergillus pseudotamarii (strain: CBS 117625, culture-collection: CBS:117625)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
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    Genomic context

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    See BDV38DRAFT_278945 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_022475021.1Genomic Context describing neighboring genes Neighboring gene fungal-specific transcription factor domain-containing protein Neighboring gene PIG-M-domain-containing protein Neighboring gene Sodium/hydrogen exchanger Neighboring gene isoprenoid synthase domain-containing protein Neighboring gene DnaJ domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022475021.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_022475021.1 Reference assembly

      Range
      283708..284556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032058866.1 → XP_031917654.1  ubiquitin carboxyl-terminal hydrolase [Aspergillus pseudotamarii]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5N6T5Y1
      Conserved Domains (1) summary
      pfam01088
      Location:19 → 227
      Peptidase_C12; Ubiquitin carboxyl-terminal hydrolase, family 1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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