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    nrbp1.L nuclear receptor binding protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 414624, updated on 20-Nov-2024

    Summary

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    Official Symbol
    nrbp1.L
    Official Full Name
    nuclear receptor binding protein 1 L homeolog
    Primary source
    Xenbase:XB-GENE-5916150
    Locus tag
    XELAEV_18028441mg
    See related
    EnsemblRapid:ENSXLAG00005022128 AllianceGenome:Xenbase:XB-GENE-5916150
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    nrbp1
    Summary
    Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within intracellular signal transduction and protein phosphorylation. Predicted to be located in cytoplasm and endomembrane system. Orthologous to human NRBP1 (nuclear receptor binding protein 1). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See nrbp1.L in Genome Data Viewer
    Location:
    chromosome: 5L
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (170210509..170246888)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (158786990..158817341)

    Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene butyrophilin subfamily 3 member A3 Neighboring gene zinc finger protein 513 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1G L homeolog Neighboring gene keratinocyte associated protein 3 L homeolog Neighboring gene intraflagellar transport 172 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC81395

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    nuclear receptor binding protein 1 L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001091195.1 → NP_001084664.1  nuclear receptor binding protein 1 L homeolog

      See identical proteins and their annotated locations for NP_001084664.1

      Status: PROVISIONAL

      Source sequence(s)
      BC068805
      UniProtKB/TrEMBL
      A0A974HKM1, Q6NTZ7
      Related
      ENSXLAP00005065133.1, ENSXLAT00005066649.1
      Conserved Domains (2) summary
      smart00220
      Location:77 → 319
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14034
      Location:52 → 328
      PK_NRBP1; Pseudokinase domain of Nuclear Receptor Binding Protein 1

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      170210509..170246888
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041562142.1 → XP_041418076.1  nuclear receptor binding protein 1 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J1KL80
      Conserved Domains (1) summary
      cd14034
      Location:52 → 336
      PK_NRBP1; Pseudokinase domain of Nuclear Receptor Binding Protein 1

    2. XM_041562141.1 → XP_041418075.1  nuclear receptor binding protein 1 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J1KL80
      Related
      ENSXLAP00005065042.1, ENSXLAT00005066557.1
      Conserved Domains (1) summary
      cd14034
      Location:52 → 336
      PK_NRBP1; Pseudokinase domain of Nuclear Receptor Binding Protein 1
    Nucleotide Protein Strain
    Heading Accession and Version

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