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    LINC02595 long intergenic non-protein coding RNA 2595 [ Homo sapiens (human) ]

    Gene ID: 401585, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC02595provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2595provided by HGNC
    Primary source
    HGNC:HGNC:53946
    See related
    AllianceGenome:HGNC:53946
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC02595 in Genome Data Viewer
    Location:
    Xp11.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (45848074..45851490, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (45257571..45260978, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (45707509..45710920, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene miR222/221 cluster host gene Neighboring gene microRNA 221 Neighboring gene microRNA 222 Neighboring gene NANOG hESC enhancer GRCh37_chrX:45645628-45646174 Neighboring gene NANOG hESC enhancer GRCh37_chrX:45661291-45661869 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:45662536-45663735 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20789 Neighboring gene small nucleolar RNA SNORD77 Neighboring gene NANOG hESC enhancer GRCh37_chrX:45768669-45769204 Neighboring gene SRSF6 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125365.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC234772

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      45848074..45851490 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      45257571..45260978 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)