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    hpRNA:CR46340 hairpin RNA:CR46340 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36786388, updated on 11-Sep-2024

    Summary

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    Official Symbol
    hpRNA:CR46340provided by FlyBase
    Official Full Name
    hairpin RNA:CR46340provided by FlyBase
    Primary source
    FLYBASE:FBgn0285994
    Locus tag
    Dmel_CR46340
    See related
    AllianceGenome:FB:FBgn0285994
    Gene type
    ncRNA
    RNA name
    other
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR46340; dme-mir-997-2; Dmel\CR46340; hp-mir-997-2; miR-997; mir-997-2
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    Genomic context

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    See hpRNA:CR46340 in Genome Data Viewer
    Location:
    78D7-78D7; 3-47 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (21576445..21576683, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43939 Neighboring gene mir-193 stem loop Neighboring gene ER membrane protein complex subunit 10 Neighboring gene Transcription factor AP-2 Neighboring gene long non-coding RNA:CR43940 Neighboring gene Site-1 protease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NT_037436.4 Chromosome 3L Reference Release 6 plus ISO1 MT Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Adaptive regulation of testis gene expression and control of male fertility by the Drosophila hairpin RNA pathway. [Corrected]. Wen J, et al. Mol Cell, 2015 Jan 8. PMID 25544562, Free PMC Article
    2. Adaptive evolution of testis-specific, recently evolved, clustered miRNAs in Drosophila. Mohammed J, et al. RNA, 2014 Aug. PMID 24942624, Free PMC Article
    3. A transgenic resource for conditional competitive inhibition of conserved Drosophila microRNAs. Fulga TA, et al. Nat Commun, 2015 Jun 17. PMID 26081261, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • alternate names: mir-997-2 stem loop
    • putative non-coding RNA; hpRNA:CR46340-RA; Dmel\hpRNA:CR46340-RA; CR46340-RA; Dmel\CR46340-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      21576445..21576683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_156793.2 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases