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    Tb927.4.2000 RuvB-like DNA helicase, putative [ Trypanosoma brucei brucei TREU927 ]

    Gene ID: 3656729, updated on 29-Oct-2024

    Summary

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    Gene symbol
    Tb927.4.2000
    Gene description
    RuvB-like DNA helicase, putative
    Locus tag
    Tb927.4.2000
    See related
    TriTrypDB:Tb927.4.2000; VEuPathDB:Tb927.4.2000
    Gene type
    protein coding
    RNA name
    RuvB-like DNA helicase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma brucei brucei TREU927 (strain: 927/4 GUTat10.1, isolate: 927/4 GUTat10.1, sub-species: brucei)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
    Also known as
    Tb04.29M18.640
    Orthologs
    all
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    Genomic context

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    See Tb927.4.2000 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_007277.1 (505347..506771, complement)

    Chromosome 4 - NC_007277.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene RNA helicase, putative Neighboring gene acyl-CoA binding protein, putative Neighboring gene mu-adaptin 3, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007277.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the African trypanosome Trypanosoma brucei. Berriman M, et al. Science, 2005 Jul 15. PMID 16020726
    2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in box C/D snoRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of NuA4 histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of R2TP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of Swr1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RuvB-like DNA helicase, putative
    XP_844350.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007277.1 Reference assembly

      Range
      505347..506771 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_839257.1 → XP_844350.1  RuvB-like DNA helicase, putative [Trypanosoma brucei brucei TREU927]

      See identical proteins and their annotated locations for XP_844350.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3L6L802, C9ZM62, D6XFD6, Q583J3
      Conserved Domains (2) summary
      pfam06068
      Location:19 → 413
      TIP49; TIP49 C-terminus
      cl26671
      Location:400 → 452
      CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
    Protein Accession Links
    GenPept Link UniProtKB Link
    AAZ10791.1

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials