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    Tb927.4.1930 RNA-binding protein, putative [ Trypanosoma brucei brucei TREU927 ]

    Gene ID: 3656720, updated on 29-Oct-2024

    Summary

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    Gene symbol
    Tb927.4.1930
    Gene description
    RNA-binding protein, putative
    Locus tag
    Tb927.4.1930
    See related
    TriTrypDB:Tb927.4.1930; VEuPathDB:Tb927.4.1930
    Gene type
    protein coding
    RNA name
    RNA-binding protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma brucei brucei TREU927 (strain: 927/4 GUTat10.1, isolate: 927/4 GUTat10.1, sub-species: brucei)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
    Also known as
    Tb04.29M18.550
    Orthologs
    all
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    Genomic context

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    See Tb927.4.1930 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_007277.1 (490448..491266, complement)

    Chromosome 4 - NC_007277.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene glycosylphosphatidylinositol (GPI) anchor, putative Neighboring gene hypothetical protein Neighboring gene NADPH--cytochrome p450 reductase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007277.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the African trypanosome Trypanosoma brucei. Berriman M, et al. Science, 2005 Jul 15. PMID 16020726
    2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of eukaryotic translation initiation factor 3 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein, putative
    XP_844343.1
    • similar along entire length to SP:O75821: Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta)(eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g). {Homo sapiens}

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007277.1 Reference assembly

      Range
      490448..491266 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_839250.1 → XP_844343.1  RNA-binding protein, putative [Trypanosoma brucei brucei TREU927]

      See identical proteins and their annotated locations for XP_844343.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D6XFC9, Q583K0
      Conserved Domains (3) summary
      COG0724
      Location:118 → 266
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12408
      Location:186 → 263
      RRM_eIF3G_like; RNA recognition motif in eukaryotic translation initiation factor 3 subunit G (eIF-3G) and similar proteins
      cl13749
      Location:39 → 87
      eIF3G; eIF3G domain found in eukaryotic translation initiation factor 3 subunit G (eIF-3G) and similar proteins
    Protein Accession Links
    GenPept Link UniProtKB Link
    AAZ10784.1

    Gene LinkOut

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    Research Materials