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    DDI1 Ddi1p [ Candida albicans SC5314 ]

    Gene ID: 3643295, updated on 30-Nov-2023

    Summary

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    Gene symbol
    DDI1
    Gene description
    Ddi1p
    Locus tag
    CAALFM_C114420WA
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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    Genomic context

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    See DDI1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_032089.1 (3169830..3170801)

    Chromosome 1 - NC_032089.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase core subunit Neighboring gene mismatch repair protein Neighboring gene RNA-binding protein Neighboring gene uncharacterized protein Neighboring gene Gdi1p Neighboring gene putative Xaa-Pro dipeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032089.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
    2. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article
    3. The diploid genome sequence of Candida albicans. Jones T, et al. Proc Natl Acad Sci U S A, 2004 May 11. PMID 15123810, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aspartic-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Ddi1p
    XP_715056.1
    • Putative DNA damage inducible v-SNARE binding protein; macrophage/pseudohyphal-repressed

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_032089.1 Reference assembly

      Range
      3169830..3170801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_709963.1 → XP_715056.1  Ddi1p [Candida albicans SC5314]

      See identical proteins and their annotated locations for XP_715056.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1D8PFX6, A0A8H6C1Q8, C4YFN7
      Conserved Domains (2) summary
      cd05479
      Location:172 → 295
      RP_DDI; retropepsin-like domain of DNA damage inducible protein
      cd01796
      Location:1 → 68
      Ubl_Ddi1_like; ubiquitin-like (Ubl) domain found in the eukaryotic Ddi1 family
    Nucleotide Protein
    Heading Accession and Version

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