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    EGR_05762 Tyrosine-protein kinase BAZ1B [ Echinococcus granulosus ]

    Gene ID: 36341477, updated on 22-Oct-2023

    Summary

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    Gene symbol
    EGR_05762
    Gene description
    Tyrosine-protein kinase BAZ1B
    Locus tag
    EGR_05762
    Gene type
    protein coding
    RNA name
    Tyrosine-protein kinase BAZ1B
    RefSeq status
    PROVISIONAL
    Organism
    Echinococcus granulosus
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus; Echinococcus granulosus group
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    Genomic context

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    See EGR_05762 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    16

    NW_020170425.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Ribosomal protein S6 kinase beta-1 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020170425.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the hydatid tapeworm Echinococcus granulosus. Zheng H, et al. Nat Genet, 2013 Oct. PMID 24013640
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H2AXY142 kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of WICH complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Tyrosine-protein kinase BAZ1B

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_020170425.1 Reference assembly

      Range
      407684..415850
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024495011.1 → XP_024350604.1  Tyrosine-protein kinase BAZ1B [Echinococcus granulosus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A068WJ85, W6UEA7
      Conserved Domains (6) summary
      cd15489
      Location:1320 → 1367
      PHD_SF; PHD finger superfamily
      pfam10537
      Location:30 → 137
      WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
      pfam15613
      Location:832 → 942
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      cl02556
      Location:1475 → 1573
      Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
      cl02608
      Location:1225 → 1277
      BAH; BAH, or Bromo Adjacent Homology domain (also called ELM1 and BAM for Bromo Adjacent Motif). BAH domains have first been described as domains found in the polybromo protein and Yeast Rsc1/Rsc2 (Remodeling of the Structure of Chromatin). They also occur in ...
      cl22851
      Location:1203 → 1248
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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