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    gip-2 Gamma-tubulin interacting protein 2 [ Caenorhabditis elegans ]

    Gene ID: 3564968, updated on 9-Dec-2024

    Summary

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    Official Symbol
    gip-2
    Official Full Name
    Gamma-tubulin interacting protein 2
    Primary source
    WormBase:WBGene00044008
    Locus tag
    CELE_C45G3.5
    See related
    AllianceGenome:WB:WBGene00044008
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in adherens junction; hemidesmosome; and microtubule. Is expressed in nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See gip-2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    9
    Sequence:
    Chromosome: I; NC_003279.8 (9228163..9232096)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene LIM domain protein;LIM zinc-binding domain-containing protein;Protein espinas Neighboring gene ncRNA Neighboring gene Calponin-homology (CH) domain-containing protein Neighboring gene BPL/LPL catalytic domain-containing protein Neighboring gene Gamma-secretase subunit aph-1 Neighboring gene Phospholipid-transporting ATPase;putative phospholipid-transporting ATPase tat-5 Neighboring gene Equilibrative nucleoside transporter 1;Equilibrative nucleoside transporter 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NOCA-1 functions with γ-tubulin and in parallel to Patronin to assemble non-centrosomal microtubule arrays in C. elegans. Wang S, et al. Elife, 2015 Sep 15. PMID 26371552, Free PMC Article
    2. PTRN-1 (CAMSAP) and NOCA-2 (NINEIN) are required for microtubule polarity in Caenorhabditis elegans dendrites. He L, et al. PLoS Biol, 2022 Nov. PMID 36395330, Free PMC Article
    3. Wnt signaling establishes the microtubule polarity in neurons through regulation of Kinesin-13. Puri D, et al. J Cell Biol, 2021 Sep 6. PMID 34137792, Free PMC Article
    4. The protein tyrosine phosphatase PPH-7 is required for fertility and embryonic development in C. elegans at elevated temperatures. Franziscus CA, et al. FEBS Open Bio, 2024 Mar. PMID 38320757, Free PMC Article
    5. Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules. Marnik EA, et al. Genetics, 2019 Nov. PMID 31506335, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in anchoring junction IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in hemidesmosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Gamma-tubulin interacting protein 2
    NP_001021044.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      9228163..9232096
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001025873.7 → NP_001021044.1  Gamma-tubulin interacting protein 2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021044.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      G5EF84
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    G5EF84.1

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