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    EHI_148840 RhoGAP domain containing protein [ Entamoeba histolytica HM-1:IMSS ]

    Gene ID: 3411867, updated on 17-May-2024

    Summary

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    Gene symbol
    EHI_148840
    Gene description
    RhoGAP domain containing protein
    Locus tag
    EHI_148840
    See related
    AmoebaDB:EHI_148840; VEuPathDB:EHI_148840
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    Old locus tag
    1.t00071
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    Genomic context

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    See EHI_148840 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001914861.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S24, putative Neighboring gene uncharacterized protein Neighboring gene 60S acidic ribosomal protein P0, putative Neighboring gene Rab GTPase activating protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001914861.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RhoGAP domain containing protein
    XP_657582.1
    • encoded by transcript EHI_148840A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001914861.1 Reference assembly

      Range
      168474..169790 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_652490.1 → XP_657582.1  RhoGAP domain containing protein [Entamoeba histolytica HM-1:IMSS]

      See identical proteins and their annotated locations for XP_657582.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A175JE17, A0A5K1U5B9, C4LT51, M2S094, M3UP94, M7VYJ0, N9TQK4
      Conserved Domains (1) summary
      cd00159
      Location:228 → 391
      RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
    Nucleotide Protein
    Heading Accession and Version

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