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    OdsH Ods-site homeobox [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32758, updated on 9-Dec-2024

    Summary

    Official Symbol
    OdsHprovided by FlyBase
    Official Full Name
    Ods-site homeoboxprovided by FlyBase
    Primary source
    FLYBASE:FBgn0026058
    Locus tag
    Dmel_CG6352
    See related
    AllianceGenome:FB:FBgn0026058
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6352; Dmel\CG6352; odsh; odsH; Odsh; OdsH[mel]
    Summary
    Predicted to enable sequence-specific double-stranded DNA binding activity. Involved in sexual reproduction. Located in extracellular space. Is expressed in embryonic hypopharynx; embryonic ventral epidermis; hypopharynx proper primordium; larval labral sensory complex; and ventral sensory complex primordium. Orthologous to human UNCX (UNC homeobox). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See OdsH in Genome Data Viewer
    Location:
    16D1-16D3; 1-58 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (17791010..17814011)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (17685043..17708044)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene raskol Neighboring gene unc-4 Neighboring gene uncharacterized protein Neighboring gene Suppressor of Cytokine Signaling at 16D

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    mobile_element

    • Loc: 17793006-17796246 mobile_element_type = transposon:flea{}152

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific double-stranded DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of gene expression IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 

    General protein information

    Preferred Names
    Ods-site homeobox
    Names
    CG6352-PA
    OdsH-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      17791010..17814011
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078665.3NP_523389.3  Ods-site homeobox [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523389.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      O96616, Q9VX20
      Related
      FBpp0074235
      Conserved Domains (1) summary
      pfam00046
      Location:162214
      Homeobox; Homeobox domain