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    Or1a Odorant receptor 1a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 30978, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or1aprovided by FlyBase
    Official Full Name
    Odorant receptor 1aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0029521
    Locus tag
    Dmel_CG17885
    See related
    AllianceGenome:FB:FBgn0029521
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    1a; 1A.1; CG17885; Dmel\CG17885; DOR68; OR1a
    Summary
    Enables olfactory receptor activity. Involved in detection of chemical stimulus involved in sensory perception of smell and olfactory behavior. Predicted to be located in dendrite membrane. Predicted to be part of cation channel complex. Predicted to be active in plasma membrane. Is expressed in larval antennal lobe glomerulus 1a and larval olfactory receptor neuron Or1a. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Or1a in Genome Data Viewer
    Location:
    1A2-1A2; 1-0 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (315123..316566)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (209156..210599)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ionotropic olfactory receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of cation channel complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in dendrite membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    odorant receptor 1a
    Names
    CG17885-PA
    Or1a-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      315123..316566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080290.4NP_525029.2  odorant receptor 1a [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_525029.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W5G6
      Related
      FBpp0070069
      Conserved Domains (1) summary
      pfam02949
      Location:79376
      7tm_6; 7tm Odorant receptor