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    Bovatus_RS21550 SGNH/GDSL hydrolase family protein [ Bacteroides ovatus ]

    Gene ID: 29455911, updated on 9-Jan-2025

    Summary

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    Gene symbol
    Bovatus_RS21550
    Gene description
    SGNH/GDSL hydrolase family protein
    Locus tag
    Bovatus_RS21550
    Gene type
    protein coding
    Organism
    Bacteroides ovatus (strain: ATCC 8483, nat-host: Homo sapiens, culture-collection: ATCC:8483, type-material: type strain of Bacteroides ovatus)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    Bovatus_04405
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    Genomic context

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    NZ_CP012938.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene glycoside hydrolase family 28 protein Neighboring gene RagB/SusD family nutrient uptake outer membrane protein Neighboring gene SusC/RagA family TonB-linked outer membrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP012938.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of Escherichia coli thioesterase I/protease I/lysophospholipase L1: consensus sequence blocks constitute the catalytic center of SGNH-hydrolases through a conserved hydrogen bond network. Lo YC, et al. J Mol Biol, 2003 Jul 11. PMID 12842470
    2. GDSL family of serine esterases/lipases. Akoh CC, et al. Prog Lipid Res, 2004 Nov. PMID 15522763
    3. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    SGNH/GDSL hydrolase family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012938.1 Reference assembly

      Range
      5712608..5713294
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004301559.1 MULTISPECIES: SGNH/GDSL hydrolase family protein [Bacteroides]

      See identical proteins and their annotated locations for WP_004301559.1

      UniProtKB/TrEMBL
      A0A1G8M418, A0A373GE32, A0AAN3D4P0
      Conserved Domains (1) summary
      pfam16255
      Location:24 → 224
      Lipase_GDSL_lke; GDSL-like Lipase/Acylhydrolase
    Nucleotide Protein
    Heading Accession and Version