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    Bovatus_RS21225 DUF5004 domain-containing protein [ Bacteroides ovatus ]

    Gene ID: 29452055, updated on 9-Jan-2025

    Summary

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    Gene symbol
    Bovatus_RS21225
    Gene description
    DUF5004 domain-containing protein
    Locus tag
    Bovatus_RS21225
    Gene type
    protein coding
    Organism
    Bacteroides ovatus (strain: ATCC 8483, nat-host: Homo sapiens, culture-collection: ATCC:8483, type-material: type strain of Bacteroides ovatus)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    Bovatus_04339
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    Genomic context

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    NZ_CP012938.1Genomic Context describing neighboring genes Neighboring gene SusC/RagA family TonB-linked outer membrane protein Neighboring gene DUF4961 domain-containing protein Neighboring gene RagB/SusD family nutrient uptake outer membrane protein Neighboring gene DUF5005 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP012938.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides. Wu M, et al. Science, 2015 Oct 2. PMID 26430127, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF5004 domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012938.1 Reference assembly

      Range
      5594132..5594587 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004301484.1 MULTISPECIES: DUF5004 domain-containing protein [Bacteroides]

      See identical proteins and their annotated locations for WP_004301484.1

      UniProtKB/TrEMBL
      A0A1H4G6K4, A0A373GBI5, A0A373GK27, A0A3A5QLY7, A0A3D2LU86, A0A553E633, A0A943JAP9, A0AAN3D4K1, D0TUR8, D4VPU6, D7J059, F7M3I3
      Conserved Domains (1) summary
      pfam16395
      Location:34 → 146
      DUF5004; Domain of unknown function (DUF5004)
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases