U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Bovatus_RS21230 RagB/SusD family nutrient uptake outer membrane protein [ Bacteroides ovatus ]

    Gene ID: 29451392, updated on 9-Jan-2025

    Summary

    Go to the top of the page Help
    Gene symbol
    Bovatus_RS21230
    Gene description
    RagB/SusD family nutrient uptake outer membrane protein
    Locus tag
    Bovatus_RS21230
    Gene type
    protein coding
    Organism
    Bacteroides ovatus (strain: ATCC 8483, nat-host: Homo sapiens, culture-collection: ATCC:8483, type-material: type strain of Bacteroides ovatus)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    Bovatus_04340
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_CP012938.1Genomic Context describing neighboring genes Neighboring gene DUF4961 domain-containing protein Neighboring gene DUF5004 domain-containing protein Neighboring gene DUF5005 domain-containing protein Neighboring gene GH92 family glycosyl hydrolase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_CP012938.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Insights into SusCD-mediated glycan import by a prominent gut symbiont. Gray DA, et al. Nat Commun, 2021 Jan 4. PMID 33398001, Free PMC Article
    2. Sus out sugars in. Gilbert HJ. Structure, 2008 Jul. PMID 18611370
    3. Glycan recognition by the Bacteroidetes Sus-like systems. Bolam DN, et al. Curr Opin Struct Biol, 2012 Oct. PMID 22819666
    4. Characterization of four outer membrane proteins involved in binding starch to the cell surface of Bacteroides thetaiotaomicron. Shipman JA, et al. J Bacteriol, 2000 Oct. PMID 10986238, Free PMC Article
    5. Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Glenwright AJ, et al. Nature, 2017 Jan 19. PMID 28077872, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    RagB/SusD family nutrient uptake outer membrane protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012938.1 Reference assembly

      Range
      5594603..5596447 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004301485.1 MULTISPECIES: RagB/SusD family nutrient uptake outer membrane protein [Bacteroides]

      See identical proteins and their annotated locations for WP_004301485.1

      UniProtKB/TrEMBL
      A0A395W0M1, A0A412W2D4, A0AAN3A397, D4VPU7
    Nucleotide Protein
    Heading Accession and Version