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    GVI51_K07711 U4/U6-U5 snRNP complex subunit DIB1 [ Nakaseomyces glabratus ]

    Gene ID: 2890364, updated on 6-Dec-2024

    Summary

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    Gene symbol
    GVI51_K07711
    Gene description
    U4/U6-U5 snRNP complex subunit DIB1
    Locus tag
    GVI51_K07711
    See related
    FungiDB:GVI51_K07711; VEuPathDB:GVI51_K07711
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See GVI51_K07711 in Genome Data Viewer
    Location:
    chromosome: K
    Exon count:
    1
    Sequence:
    Chromosome: K; NC_088961.1 (784076..784504, complement)

    Chromosome K - NC_088961.1Genomic Context describing neighboring genes Neighboring gene L-aminoadipate-semialdehyde dehydrogenase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088961.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0K07854g
      Ortholog(s) have role in mRNA splicing, via spliceosome and U4/U6 x U5 tri-snRNP complex, U5 snRNP localization

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U5 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    U4/U6-U5 snRNP complex subunit DIB1
    XP_448562.1
    • CAGL0K07854g
      Ortholog(s) have role in mRNA splicing, via spliceosome and U4/U6 x U5 tri-snRNP complex, U5 snRNP localization

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088961.1 Reference assembly

      Range
      784076..784504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_448562.1 → XP_448562.1  U4/U6-U5 snRNP complex subunit DIB1 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_448562.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q6FMI2
      UniProtKB/TrEMBL
      A0A0W0EB77
      Conserved Domains (1) summary
      pfam02966
      Location:3 → 135
      DIM1; Mitosis protein DIM1
    Nucleotide Protein
    Heading Accession and Version

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