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    GVI51_A01507 arginine--tRNA ligase MSR1 [ Nakaseomyces glabratus ]

    Gene ID: 2886306, updated on 6-Dec-2024

    Summary

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    Gene symbol
    GVI51_A01507
    Gene description
    arginine--tRNA ligase MSR1
    Locus tag
    GVI51_A01507
    See related
    FungiDB:GVI51_A01507; VEuPathDB:GVI51_A01507
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See GVI51_A01507 in Genome Data Viewer
    Location:
    chromosome: A
    Exon count:
    1
    Sequence:
    Chromosome: A; NC_088951.1 (187256..189073, complement)

    Chromosome A - NC_088951.1Genomic Context describing neighboring genes Neighboring gene nicotinamidase Neighboring gene initiation-specific alpha-1,6-mannosyltransferase Neighboring gene HXT4 Neighboring gene HXT1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088951.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0A01760g
      Ortholog(s) have arginine-tRNA ligase activity, role in arginyl-tRNA aminoacylation and mitochondrion localization

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables arginine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in arginyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arginine--tRNA ligase MSR1
    XP_444842.1
    • CAGL0A01760g
      Ortholog(s) have arginine-tRNA ligase activity, role in arginyl-tRNA aminoacylation and mitochondrion localization

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088951.1 Reference assembly

      Range
      187256..189073 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_444842.1 → XP_444842.1  arginine--tRNA ligase MSR1 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_444842.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0DUK7, Q6FY18
      Conserved Domains (1) summary
      COG0018
      Location:29 → 605
      ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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