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    SAPIO_CDS5082 uncharacterized protein [ Scedosporium apiospermum ]

    Gene ID: 27724154, updated on 17-May-2024

    Summary

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    Gene symbol
    SAPIO_CDS5082
    Gene description
    uncharacterized protein
    Locus tag
    SAPIO_CDS5082
    See related
    FungiDB:SAPIO_CDS5082; VEuPathDB:SAPIO_CDS5082
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Scedosporium apiospermum (strain: IHEM 14462, nat-host: Homo sapiens)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Microascaceae; Scedosporium
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    Genomic context

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    See SAPIO_CDS5082 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    6

    NW_015971798.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015971798.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft Genome Sequence of the Pathogenic Fungus Scedosporium apiospermum. Vandeputte P, et al. Genome Announc, 2014 Oct 2. PMID 25278533, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables linear primary-alkylsulfatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dodecyl sulfate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_015971798.1 Reference assembly

      Range
      2672..5927
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016787478.1 → XP_016642809.1  uncharacterized protein SAPIO_CDS5082 [Scedosporium apiospermum]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A084G6P8
      Conserved Domains (6) summary
      cd07295
      Location:671 → 786
      PX_Grd19; The phosphoinositide binding Phox Homology domain of fungal Grd19
      COG0491
      Location:63 → 333
      GloB; Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II [General function prediction only]
      COG5391
      Location:612 → 784
      COG5391; Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only]
      pfam14863
      Location:348 → 483
      Alkyl_sulf_dimr; Alkyl sulfatase dimerization
      pfam14864
      Location:501 → 574
      Alkyl_sulf_C; Alkyl sulfatase C-terminal
      cd07710
      Location:69 → 314
      arylsulfatase_Sdsa1-like_MBL-fold; Pseudomonas aeruginosa arylsulfatase SdsA1, Pseudomonas sp. DSM6611 arylsulfatase Pisa1, and related proteins; MBL-fold metallo-hydrolase domain
    Nucleotide Protein
    Heading Accession and Version

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