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    Cd200r2 Cd200 receptor 2 [ Mus musculus (house mouse) ]

    Gene ID: 271375, updated on 27-Nov-2024

    Summary

    Official Symbol
    Cd200r2provided by MGI
    Official Full Name
    Cd200 receptor 2provided by MGI
    Primary source
    MGI:MGI:3042847
    See related
    Ensembl:ENSMUSG00000090176 AllianceGenome:MGI:3042847
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cd200r1l
    Summary
    Enables signaling receptor activity. Predicted to be involved in regulation of neuroinflammatory response. Located in external side of plasma membrane. Is expressed in nervous system and sensory organ. Orthologous to several human genes including CD200R1 (CD200 receptor 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Cd200r2 in Genome Data Viewer
    Location:
    16 B4; 16 29.17 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (44687460..44736203)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (44867097..44915840)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene CD200 receptor 4 Neighboring gene lactate dehydrogenase A pseudogene Neighboring gene predicted gene, 53957 Neighboring gene Cd200 receptor 2 pseudogene Neighboring gene CD200 receptor 3 Neighboring gene STARR-positive B cell enhancer ABC_E7453 Neighboring gene STARR-seq mESC enhancer starr_40912 Neighboring gene predicted gene, 53958

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables signaling receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of neuroinflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in external side of plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    cell surface glycoprotein CD200 receptor 2
    Names
    CD200 cell surface glycoprotein receptor
    CD200 cell surface glycoprotein receptor-like 2
    CD200 cell surface glycoprotein receptor-like c
    CD200 receptor-like 2
    CD200RLc
    cell surface glycoprotein OX2 receptor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_206535.1NP_996258.1  cell surface glycoprotein CD200 receptor 2 precursor

      See identical proteins and their annotated locations for NP_996258.1

      Status: PROVISIONAL

      Source sequence(s)
      AY230198
      Consensus CDS
      CCDS28191.1
      UniProtKB/Swiss-Prot
      Q6XJV6
      Related
      ENSMUSP00000099869.4, ENSMUST00000102805.4
      Conserved Domains (1) summary
      cl11960
      Location:141201
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      44687460..44736203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)