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    lncRNA:CR45919 long non-coding RNA:CR45919 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 26067247, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lncRNA:CR45919provided by FlyBase
    Official Full Name
    long non-coding RNA:CR45919provided by FlyBase
    Primary source
    FLYBASE:FBgn0267579
    Locus tag
    Dmel_CR45919
    See related
    AllianceGenome:FB:FBgn0267579
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR45919; Dmel\CR45919; pri-mir-124
    Summary
    Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lncRNA:CR45919 in Genome Data Viewer
    Location:
    36D1-36D1; 2-53 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (17560813..17566551)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45697 Neighboring gene uncharacterized protein Neighboring gene mir-124 stem loop Neighboring gene long non-coding RNA:CR45358 Neighboring gene mir-287 stem loop

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NT_033779.5 Chromosome 2L Reference Release 6 plus ISO1 MT Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative Expression Dynamics of Intergenic Long Noncoding RNAs in the Genus Drosophila. Nyberg KG, et al. Genome Biol Evol, 2016 Jun 27. PMID 27189981, Free PMC Article
    2. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR45919-RA; Dmel\lncRNA:CR45919-RA; CR45919-RA; Dmel\CR45919-RA
    • lncRNA:CR45919-RB; Dmel\lncRNA:CR45919-RB; CR45919-RB; Dmel\CR45919-RB

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in miRNA-mediated post-transcriptional gene silencing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of RISC complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      17560813..17566551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_133086.1 RNA Sequence

      Status: REVIEWED

    2. NR_133087.1 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.